Determination of FGFR1 Functions in Cytarabine Treatment of Acute Myeloid Leukemia Through Bioinformatics Analysis

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Aims: Acute myeloid leukemia (LAML) is among the most prevalent subtypes of acute leukemia. Consequently, it is essential to understand the molecular causes of LAML and find its predictive and diagnostic biomarkers. The aim of this study is to determine the molecular functions of fibroblast growth factor receptor 1(FGFR1) involved in LAML pathogenesis and its potential therapeutic effect for LAML treatment. Methods: The molecular docking interaction of the Cytarabine with its target FGFR1 was examined. The Gene Expression Profiling Interactive Analysis, version 2 (GEPIA2), and UALCAN tools database were used to obtain the LAML gene expression datasets. Gene functional annotation was performed to investigate the DEGs' possible role. Using the interactive gene database retrieval tool STRING and a few chosen hub modules from the GeneMANIA database, the gene-gene and protein-protein interaction (PPI) network were constructed. A survival analysis was performed on the effects of hub genes on the overall survival of LAML patients. Results: As a result of docking, a strong interaction was observed between cytarabine and FGFR1. It has been discovered that cytarabine can reverse FGFR1 expression. The survival study results showed an association between the prognosis of LAML patients and one of the central genes, FGFR1. Conclusion: The expression profile and functions of FGFR1 were determined in LAML patients. It has been shown that FGFR1 can be a viable therapeutic target for LAML and a possible biomarker for diagnosis. © 2024 Bentham Science Publishers.

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AlanDeğerDil
dc.contributor.authorMisir, Sema
dc.contributor.authorYaman, Serap Ozer
dc.contributor.authorAykac, Okan
dc.contributor.authorAkidan, Osman
dc.contributor.authorMerde, Irem Bozbey
dc.contributor.authorHepokur, Ceylan
dc.date.accessioned2026-10-18T20:26:51.223144306Z
dc.date.available2026-10-18T20:26:51.223144306Z
dc.date.issued2024
dc.description.abstractAims: Acute myeloid leukemia (LAML) is among the most prevalent subtypes of acute leukemia. Consequently, it is essential to understand the molecular causes of LAML and find its predictive and diagnostic biomarkers. The aim of this study is to determine the molecular functions of fibroblast growth factor receptor 1(FGFR1) involved in LAML pathogenesis and its potential therapeutic effect for LAML treatment. Methods: The molecular docking interaction of the Cytarabine with its target FGFR1 was examined. The Gene Expression Profiling Interactive Analysis, version 2 (GEPIA2), and UALCAN tools database were used to obtain the LAML gene expression datasets. Gene functional annotation was performed to investigate the DEGs' possible role. Using the interactive gene database retrieval tool STRING and a few chosen hub modules from the GeneMANIA database, the gene-gene and protein-protein interaction (PPI) network were constructed. A survival analysis was performed on the effects of hub genes on the overall survival of LAML patients. Results: As a result of docking, a strong interaction was observed between cytarabine and FGFR1. It has been discovered that cytarabine can reverse FGFR1 expression. The survival study results showed an association between the prognosis of LAML patients and one of the central genes, FGFR1. Conclusion: The expression profile and functions of FGFR1 were determined in LAML patients. It has been shown that FGFR1 can be a viable therapeutic target for LAML and a possible biomarker for diagnosis. © 2024 Bentham Science Publishers.
dc.description.sponsorshipTIMER, GEPIA, UALCAN, GeneMANIA, and STRING databases, for which the authors are grateful.
dc.identifier.doi10.2174/0115701646326324240924163955
dc.identifier.eissn1875-6247
dc.identifier.endpage448
dc.identifier.issn1570-1646
dc.identifier.issue5
dc.identifier.scopus2-s2.0-105004891443
dc.identifier.startpage437
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/11860
dc.identifier.volume21
dc.identifier.wosWOS:001333964700001
dc.language.isoen
dc.publisherBentham Science Publishers
dc.relation.ispartofCurrent Proteomics
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAcute myeloid leukemia
dc.subjectcytarabine
dc.subjectFGFR1
dc.subjectLAML
dc.subjectmolecular docking
dc.subjectfibroblast growth factor receptor 1
dc.subjectsulfatinib
dc.subjectArticle
dc.subjectbioinformatics
dc.subjectcancer patient
dc.subjectcancer prognosis
dc.subjectcancer survival
dc.subjectcarcinogenesis
dc.subjectcontrolled study
dc.subjectdrug protein binding
dc.subjectdrug targeting
dc.subjectgene expression
dc.subjectgene expression profiling
dc.subjectgenetic database
dc.subjecthuman
dc.subjecthuman tissue
dc.subjectoverall survival
dc.subjectprotein expression
dc.subjectprotein protein interaction
dc.subjecttherapy effect
dc.titleDetermination of FGFR1 Functions in Cytarabine Treatment of Acute Myeloid Leukemia Through Bioinformatics Analysis
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus2
rdl.citation.wos2
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)