A novel series of thiosemicarbazone hybrid scaffolds: Design, synthesis, DFT studies, metabolic enzyme inhibition properties, and molecular docking calculations

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The fourteen new thiosemicarbazone derivatives of Schiff base were synthesized from the condensation reactions of two different aldehydes (3‑hydroxy-4-methoxhybenzaldehyde and 3-ethoxhy-4-hydroxybenzaldehyde) with various substituted-thiosemicarbazides. Structures of the compounds (1-14) were characterized by using FT-IR, 1H NMR, and 13C NMR spectroscopic techniques, and elemental analysis. Furthermore, the enzyme inhibitory effect of the obtained hybrid scaffolds was studied. They exhibited highly potent inhibition effect on acetylcholinesterase (AChE) and carbonic anhydrases (hCAs) (KI values are in the range of 111.00 ± 12.12 to 381.60 ± 38.10 nM, 120.60 ± 20.45 to 338.90 ± 42.18 nM, and 100.60 ± 11.31 to 285.30 ± 45.27 nM for AChE, hCA I, and hCA II, respectively). DFT analyzes were performed to demonstrate the usability of some electronic parameters and nucleophilic-electrophilic attack abilities of the compounds in predicting enzyme inhibition properties. A correlation was seen between the HOMO energy eigenvalues of the compounds and the inhibition reactivity, and revealing that QTAIM calculations could also be used to predict the probability of electrophilic and nucleophilic attacks. Findings supporting that hCA I and AChE enzyme inhibition reactions primarily proceed through electrophilic attack, while hCA II reactions tend to occur via nucleophilic attack have been obtained. Also, molecular docking studies were conducted to confirm the outcomes of studies on binding affinities and the most powerful derivatives. The obtained results showed that the novel thiosemicarbazone derivatives may lead to the development of novel types of pharmacological agents in the treatment of patients with Alzheimer's disease, idiopathic intracranial hypertension, glaucoma, and related conditions. © 2023 Elsevier B.V.

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AlanDeğerDil
dc.contributor.authorYakan, Hasan
dc.contributor.authorMuğlu, Halit
dc.contributor.authorTürkeş, Cüneyt
dc.contributor.authorDemir, Yeliz
dc.contributor.authorErdoğan, Musa
dc.contributor.authorÇavuş, Muhammet Serdar
dc.contributor.authorBeydemir, Şükrü
dc.date.accessioned2026-10-18T20:27:13.865161098Z
dc.date.available2026-10-18T20:27:13.865161098Z
dc.date.issued2023
dc.description.abstractThe fourteen new thiosemicarbazone derivatives of Schiff base were synthesized from the condensation reactions of two different aldehydes (3‑hydroxy-4-methoxhybenzaldehyde and 3-ethoxhy-4-hydroxybenzaldehyde) with various substituted-thiosemicarbazides. Structures of the compounds (1-14) were characterized by using FT-IR, 1H NMR, and 13C NMR spectroscopic techniques, and elemental analysis. Furthermore, the enzyme inhibitory effect of the obtained hybrid scaffolds was studied. They exhibited highly potent inhibition effect on acetylcholinesterase (AChE) and carbonic anhydrases (hCAs) (KI values are in the range of 111.00 ± 12.12 to 381.60 ± 38.10 nM, 120.60 ± 20.45 to 338.90 ± 42.18 nM, and 100.60 ± 11.31 to 285.30 ± 45.27 nM for AChE, hCA I, and hCA II, respectively). DFT analyzes were performed to demonstrate the usability of some electronic parameters and nucleophilic-electrophilic attack abilities of the compounds in predicting enzyme inhibition properties. A correlation was seen between the HOMO energy eigenvalues of the compounds and the inhibition reactivity, and revealing that QTAIM calculations could also be used to predict the probability of electrophilic and nucleophilic attacks. Findings supporting that hCA I and AChE enzyme inhibition reactions primarily proceed through electrophilic attack, while hCA II reactions tend to occur via nucleophilic attack have been obtained. Also, molecular docking studies were conducted to confirm the outcomes of studies on binding affinities and the most powerful derivatives. The obtained results showed that the novel thiosemicarbazone derivatives may lead to the development of novel types of pharmacological agents in the treatment of patients with Alzheimer's disease, idiopathic intracranial hypertension, glaucoma, and related conditions. © 2023 Elsevier B.V.
dc.description.sponsorshipFunding text 1: We would like to thank the Research Fund of Anadolu University (grant number 2102S003). The DFT calculations reported in this paper were partially performed at TUBITAK ULAKBIM, High Performance and Grid Computing Center (TRUBA resources).; Funding text 2: We would like to thank the Research Fund of Anadolu University (grant number 2102S003 ). The DFT calculations reported in this paper were partially performed at TUBITAK ULAKBIM, High Performance and Grid Computing Center (TRUBA resources).
dc.identifier.doi10.1016/j.molstruc.2023.135077
dc.identifier.issn0022-2860
dc.identifier.scopus2-s2.0-85147543422
dc.identifier.startpage135077
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/12315
dc.identifier.volume1280
dc.language.isoen
dc.publisherElsevier B.V.
dc.relation.ispartofJournal of Molecular Structure
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectDFT
dc.subjectEnzyme inhibition
dc.subjectIsothiocyanates
dc.subjectMolecular docking
dc.subjectSchiff base condensation
dc.subjectThiosemicarbazones
dc.subjectBinding energy
dc.subjectCarbonic anhydrase
dc.subjectCondensation
dc.subjectCondensation reactions
dc.subjectEigenvalues and eigenfunctions
dc.subjectMolecular modeling
dc.subjectNeurodegenerative diseases
dc.subjectPatient treatment
dc.subjectPhenols
dc.subjectScaffolds
dc.subjectSpectroscopic analysis
dc.subjectAcetylcholinesterase
dc.subjectElectrophilic attack
dc.subjectHybrid scaffolds
dc.subjectInhibition property
dc.subjectNucleophilic attack
dc.titleA novel series of thiosemicarbazone hybrid scaffolds: Design, synthesis, DFT studies, metabolic enzyme inhibition properties, and molecular docking calculations
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus59
rdl.source.indexSCOPUS