Phthalimide–benzoic acid hybrids as potent aldose reductase inhibitors: Synthesis, enzymatic kinetics, and in silico characterization

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Özet

Aldose reductase (ALR2; AKR1B1) is implicated in hyperglycemia-driven tissue injury and remains a tractable enzymatic target. We developed a concise, chromatography-free two-step route to phthalimide–benzoic acid hybrids ( 5a–5m) and profiled their biochemical activity against human ALR2. Across the series, halogenated analogs were most active, with the para-bromophenyl derivative5demerging as the top hit (KI = 7.56 nM). Steady-state kinetic analysis indicated a competitive inhibition mechanism. Molecular docking to the ALR2 active site (PDB4JIR), supported by MM-GBSA rescoring, yielded a catalytically consistent binding mode featuring hydrogen-bonding within the anion-binding region (Tyr48, His110) and complementary hydrophobic contacts (Trp111, Trp219), with Cys298 contributing as a proximal hydrophobic contact. In cell-based assays (A549, Hep3B, L929), the compounds generally showed low intrinsic cytotoxicity at the tested concentrations, suggesting a favorable preliminary safety margin aligned with their ALR2-directed pharmacology. In silico ADME/Tox assessments further supported oral drug-likeness. Overall, these results identify phthalimide–benzoic acid hybrids as tractable ALR2 inhibitor scaffolds that combine potent biochemical inhibition with a competitive kinetic profile and encouraging early safety signals, warranting in vivo evaluation and SAR-guided optimization. © 2025 Elsevier Ltd. All rights are reserved, including those for text and data mining, AI training, and similar technologies.

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RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/ebyu/10903Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.1016/j.bmc.2025.118416Yayıncı resmi DOI adresi
Tam Kayıt
AlanDeğerDil
dc.contributor.authorHoti, Dafina
dc.contributor.authorNixha, Arleta Rifati
dc.contributor.authorDuran, Hatice Esra
dc.contributor.authorArslan, Mustafa
dc.contributor.authorYıldıztekin, Gizem
dc.contributor.authorEce, Abdulilah
dc.contributor.authorTürkeş, Cüneyt
dc.date.accessioned2026-10-18T20:26:00.912259530Z
dc.date.available2026-10-18T20:26:00.912259530Z
dc.date.issued2025
dc.description.abstractAldose reductase (ALR2; AKR1B1) is implicated in hyperglycemia-driven tissue injury and remains a tractable enzymatic target. We developed a concise, chromatography-free two-step route to phthalimide–benzoic acid hybrids ( 5a–5m) and profiled their biochemical activity against human ALR2. Across the series, halogenated analogs were most active, with the para-bromophenyl derivative5demerging as the top hit (KI = 7.56 nM). Steady-state kinetic analysis indicated a competitive inhibition mechanism. Molecular docking to the ALR2 active site (PDB4JIR), supported by MM-GBSA rescoring, yielded a catalytically consistent binding mode featuring hydrogen-bonding within the anion-binding region (Tyr48, His110) and complementary hydrophobic contacts (Trp111, Trp219), with Cys298 contributing as a proximal hydrophobic contact. In cell-based assays (A549, Hep3B, L929), the compounds generally showed low intrinsic cytotoxicity at the tested concentrations, suggesting a favorable preliminary safety margin aligned with their ALR2-directed pharmacology. In silico ADME/Tox assessments further supported oral drug-likeness. Overall, these results identify phthalimide–benzoic acid hybrids as tractable ALR2 inhibitor scaffolds that combine potent biochemical inhibition with a competitive kinetic profile and encouraging early safety signals, warranting in vivo evaluation and SAR-guided optimization. © 2025 Elsevier Ltd. All rights are reserved, including those for text and data mining, AI training, and similar technologies.
dc.identifier.doi10.1016/j.bmc.2025.118416
dc.identifier.issn0968-0896
dc.identifier.pmid41027295
dc.identifier.scopus2-s2.0-105018086177
dc.identifier.startpage118416
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/10903
dc.identifier.volume131
dc.language.isoen
dc.publisherElsevier Ltd
dc.relation.ispartofBioorganic and Medicinal Chemistry
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectADME/Tox prediction
dc.subjectAldose reductase inhibitors (ALR2 AKR1B1)
dc.subjectDiabetic complications / polyol pathway
dc.subjectEnzyme kinetics (competitive inhibition)
dc.subjectMM-GBSA binding energy
dc.subjectMolecular docking
dc.subjectPhthalimide–benzoic acid hybrids
dc.subjectStructure–activity relationship (SAR)
dc.subjectAldehyde Reductase
dc.subjectAnimals
dc.subjectBenzoic Acid
dc.subjectDose-Response Relationship, Drug
dc.subjectEnzyme Inhibitors
dc.subjectHumans
dc.subjectKinetics
dc.subjectMolecular Docking Simulation
dc.subjectMolecular Structure
dc.subjectPhthalimides
dc.subjectStructure-Activity Relationship
dc.subject2 ethoxy 2 oxoethyl 1,3 dioxo 2 (4 sulfamoylphenyl)isoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 1,3 dioxo 2 phenylisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (2 chlorophenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (2,6 dimethylphenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (3 iodophenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (3,4 dimethoxyphenethyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (4 acetylphenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (4 bromophenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (4 chlorophenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (4 cyanophenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.subject2 ethoxy 2 oxoethyl 2 (4 fluorophenyl) 1,3 dioxoisoindoline 5 carboxylate
dc.titlePhthalimide–benzoic acid hybrids as potent aldose reductase inhibitors: Synthesis, enzymatic kinetics, and in silico characterization
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus44
rdl.departmentDepartment of Pharmaceutical Toxicology, Faculty of Pharmacy, Erzincan Binali Yıldırım University, Erzincan TR-24002, Turkiye. | Department of Biochemistry, Faculty of Pharmacy, Erzincan Binali Yıldırım University, Erzincan TR-24002, Turkiye. Electronic address: cuneyt.turkes@erzincan.edu.tr.
rdl.source.indexSCOPUS
rdl.source.indexPUBMED