Structure-based inhibition of acetylcholinesterase and butyrylcholinesterase with 2-Aryl-6-carboxamide benzoxazole derivatives: synthesis, enzymatic assay, and in silico studies

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Özet

An important research topic is the discovery of multifunctional compounds targeting different disease-causing components. This research aimed to design and synthesize a series of 2-aryl-6-carboxamide benzoxazole derivatives that inhibit cholinesterases on both the peripheral anionic and catalytic anionic sides. Compounds (7–48) were prepared from 4-amino-3-hydroxybenzoic acid in three steps. The Ellman test, molecular docking with Maestro, and molecular dynamics simulation studies with Desmond were done (Schrodinger, 12.8.117). Compound 36, the most potent compound among the 42 new compounds synthesized, had an inhibitory concentration of IC50 12.62 nM for AChE and IC50 25.45 nM for BChE (whereas donepezil was 69.3 nM and 63.0 nM, respectively). Additionally, compound 36 had docking values ​​of − 7.29 kcal/mol for AChE and − 6.71 kcal/mol for BChE (whereas donepezil was − 6.49 kcal/mol and − 5.057 kcal/mol, respectively). Furthermore, molecular dynamics simulations revealed that compound 36 is stable in the active gorges of both AChE (average RMSD: 1.98 Å) and BChE (average RMSD: 2.2 Å) (donepezil had average RMSD: 1.65 Å and 2.7 Å, respectively). The results show that compound 36 is a potent, selective, mixed-type dual inhibitor of both acetylcholinesterase and butyrylcholinesterase. It does this by binding to both the catalytically active and peripheral anionic sites of cholinesterases at the same time. These findings show that target compounds may be useful for establishing the structural basis for new anti-Alzheimer agents. © The Author(s) 2024.

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https://rdlopen.rawdatalibrary.net/r/ebyu/11286Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.1007/s11030-024-10828-6Yayıncı resmi DOI adresi
Tam Kayıt
AlanDeğerDil
dc.contributor.authorKuzu, Burak
dc.contributor.authorAlagoz, M. Abdullah
dc.contributor.authorDemir, Yeliz
dc.contributor.authorGulcin, Ilhami
dc.contributor.authorBurmaoglu, Serdar
dc.contributor.authorAlgul, Oztekin
dc.date.accessioned2026-10-18T20:26:21.639696699Z
dc.date.available2026-10-18T20:26:21.639696699Z
dc.date.issued2025
dc.description.abstractAn important research topic is the discovery of multifunctional compounds targeting different disease-causing components. This research aimed to design and synthesize a series of 2-aryl-6-carboxamide benzoxazole derivatives that inhibit cholinesterases on both the peripheral anionic and catalytic anionic sides. Compounds (7–48) were prepared from 4-amino-3-hydroxybenzoic acid in three steps. The Ellman test, molecular docking with Maestro, and molecular dynamics simulation studies with Desmond were done (Schrodinger, 12.8.117). Compound 36, the most potent compound among the 42 new compounds synthesized, had an inhibitory concentration of IC50 12.62 nM for AChE and IC50 25.45 nM for BChE (whereas donepezil was 69.3 nM and 63.0 nM, respectively). Additionally, compound 36 had docking values ​​of − 7.29 kcal/mol for AChE and − 6.71 kcal/mol for BChE (whereas donepezil was − 6.49 kcal/mol and − 5.057 kcal/mol, respectively). Furthermore, molecular dynamics simulations revealed that compound 36 is stable in the active gorges of both AChE (average RMSD: 1.98 Å) and BChE (average RMSD: 2.2 Å) (donepezil had average RMSD: 1.65 Å and 2.7 Å, respectively). The results show that compound 36 is a potent, selective, mixed-type dual inhibitor of both acetylcholinesterase and butyrylcholinesterase. It does this by binding to both the catalytically active and peripheral anionic sites of cholinesterases at the same time. These findings show that target compounds may be useful for establishing the structural basis for new anti-Alzheimer agents. © The Author(s) 2024.
dc.description.sponsorshipOpen access funding provided by the Scientific and Technological Research Council of T\u00FCrkiye (T\u00DCB\u0130TAK).
dc.identifier.doi10.1007/s11030-024-10828-6
dc.identifier.eissn1573-501X
dc.identifier.endpage693
dc.identifier.issn1381-1991
dc.identifier.issue1
dc.identifier.pmcidPMC11785640
dc.identifier.pmid38554169
dc.identifier.scopus2-s2.0-85189200727
dc.identifier.startpage671
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/11286
dc.identifier.volume29
dc.identifier.wosWOS:001194827100003
dc.language.isoen
dc.publisherSpringer Nature
dc.relation.ispartofMolecular Diversity
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectAcetylcholinesterase
dc.subjectBenzoxazole
dc.subjectButyrylcholinesterase
dc.subjectEnzyme inhibition
dc.subjectMolecular docking and dynamic simulation
dc.subjectBenzoxazoles
dc.subjectCholinesterase Inhibitors
dc.subjectComputer Simulation
dc.subjectHumans
dc.subjectMolecular Docking Simulation
dc.subjectMolecular Dynamics Simulation
dc.subjectStructure-Activity Relationship
dc.subject2 Aryl 6 carboxamide benzoxazole derivative
dc.subject2 pyrrole carboxaldehyde
dc.subject2 thiophenecarboxaldehyde
dc.subject2-(Naphthalen-1-yl)-N,Ndipropylbenzo[d]oxazole-6-carboxamide
dc.subject2-(Naphthalen-1-yl)benzo[doxazol-6-yl)(piperidin-1-yl)methanone
dc.subject2-(Naphthalen-1-yl)benzo[doxazol-6-yl)(pyrrolidin-1-yl)methanone
dc.subject2-(Pyridin-4-yl)benzo[doxazol-6-yl)(pyrrolidin-1-yl)methanone
dc.subject2-([1,1’-Biphenyl]-4-yl)-N,N-diethylbenzo[doxazole-6-carboxamide
dc.subject2-([1,1’-Biphenyl]-4-yl)-N,N-dimethylbenzo[d]oxazole-6-carboxamide
dc.subject2-([1,1’-Biphenyl]-4-yl)-N,N-dipropylbenzo[d]oxazole-6-carboxamide
dc.subject2-([1,1’-Biphenyl]-4-yl)benzo[d]oxazol-6-yl)(morpholino)methanone
dc.subject2-([1,1’-Biphenyl]-4-yl)benzo[d]oxazol-6-yl)(piperidin-1-yl)methanone
dc.subject2-([1,1’-Biphenyl]-4-yl)benzo[d]oxazol-6-yl)(pyrrolidin-1-yl)methanone
dc.subject2-Phenyl-N,Ndipropylbenzo[d]oxazole-6-carboxamide
dc.subject2-Phenylbenzo[d oxazol-6-yl)(piperidin-1-yl)methanone
dc.subject2-Phenylbenzo[d oxazol-6-yl)(pyrrolidin-1-yl) methanone
dc.subject4 Amino 3 hydroxy benzoic acid
dc.subject4 pyridinecarboxaldehyde
dc.titleStructure-based inhibition of acetylcholinesterase and butyrylcholinesterase with 2-Aryl-6-carboxamide benzoxazole derivatives: synthesis, enzymatic assay, and in silico studies
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus47
rdl.citation.wos47
rdl.departmentDepartment of Pharmaceutical Chemistry, Faculty of Pharmacy, Erzincan Binali Yildirim University, Erzincan, 24100, Turkey. oztekinalgul@mersin.edu.tr.
rdl.oa.statusgold
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)