Genetic diversity and structure analysis of ‘Ak Sakı’ and ‘Kara Sakı’ apple cultivars growing in Erzincan/Türkiye; [Analiza genetske raznovrsnosti i strukture sorti jabuka ‘‘Ak Sakı’’ i ‘‘Kara Sakı’’ koje rastu u Erzindžanu/Turska]

ArticleAçık Erişim

Özet

In this study, ‘Ak Sakı’ and ‘Kara Sakı’ apple cultivars were collected from different locations in Erzincan province, Türkiye, and genetic diversity was determined using the Start Codon Targeted (SCoT) marker technique. The SCoT marker technique was chosen because its gene targeting, long primer, and high annealing temperature make it more effective than other marker techniques. Using ten SCoT primers, 60 bands were obtained, and 42 of them were polymorphic. The polymorphism rate was determined to be 70%. The UPGMA (Unweighted Pair Group Method with Arithmetic mean) dendrogram created using the PAUP 4.0b10 program consists of two clades. The genetic distance between apple cultivars varies between 0.13462 and 0.45614. Principal Component Analysis (PCA) results were compatible with the UPGMA dendrogram. With the SCoT marker technique, genetic diversity among apple cultivars can be determined in a shorter time and with more reliable results. © 2024 Sevindik et al.

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RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/ebyu/11778Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.5281/zenodo.14258237Yayıncı resmi DOI adresi
Tam Kayıt
AlanDeğerDil
dc.contributor.authorSevindik, Emre
dc.contributor.authorYangılar, Filiz
dc.contributor.authorAtasagun, Bayram
dc.contributor.authorSofyalıoğlu, Erengül
dc.contributor.authorŞimşek, Selçuk Alp
dc.contributor.authorÇayır, Muhammed Ebrar
dc.contributor.authorVivodík, Martin
dc.date.accessioned2026-10-18T20:26:46.452384205Z
dc.date.available2026-10-18T20:26:46.452384205Z
dc.date.issued2024
dc.description.abstractIn this study, ‘Ak Sakı’ and ‘Kara Sakı’ apple cultivars were collected from different locations in Erzincan province, Türkiye, and genetic diversity was determined using the Start Codon Targeted (SCoT) marker technique. The SCoT marker technique was chosen because its gene targeting, long primer, and high annealing temperature make it more effective than other marker techniques. Using ten SCoT primers, 60 bands were obtained, and 42 of them were polymorphic. The polymorphism rate was determined to be 70%. The UPGMA (Unweighted Pair Group Method with Arithmetic mean) dendrogram created using the PAUP 4.0b10 program consists of two clades. The genetic distance between apple cultivars varies between 0.13462 and 0.45614. Principal Component Analysis (PCA) results were compatible with the UPGMA dendrogram. With the SCoT marker technique, genetic diversity among apple cultivars can be determined in a shorter time and with more reliable results. © 2024 Sevindik et al.
dc.identifier.doi10.5281/zenodo.14258237
dc.identifier.endpage68
dc.identifier.issn2217-4478
dc.identifier.issue2
dc.identifier.scopus2-s2.0-85218782092
dc.identifier.startpage61
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/11778
dc.identifier.volume15
dc.language.isoen
dc.publisherUniversity of Nis Faculty of Science and Mathematics
dc.relation.ispartofBiologica Nyssana
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectapple
dc.subjectgenetic diversity
dc.subjectSCoT
dc.subjectTürkiye
dc.titleGenetic diversity and structure analysis of ‘Ak Sakı’ and ‘Kara Sakı’ apple cultivars growing in Erzincan/Türkiye; [Analiza genetske raznovrsnosti i strukture sorti jabuka ‘‘Ak Sakı’’ i ‘‘Kara Sakı’’ koje rastu u Erzindžanu/Turska]
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus2
rdl.source.indexSCOPUS