Calcium channel blockers: molecular docking and inhibition studies on carbonic anhydrase I and II isoenzymes

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Carbonic anhydrases (CAs) are potent dehydration of carbonic acid and catalyst of the reversible hydration of carbon dioxide. Here, CA I and CA II was purified from human erythrocytes using the simple chromatographic method and determined the interactions between some calcium channel blockers and the enzymes. Molecular docking studies were performed these compounds. It was found that calcium channel blockers (nimodipine, nilvadipine, nitrendipine, isradipine, and nifedipine) exhibit potential inhibitor properties for hCA I and hCA II. IC 50 values of hCA I were in the range of 9.24-58.00 μM, and K i constants were in the range of 7.60 ± 2.68-35.92 ± 16.01 μM. IC 50 values of hCA II were in the range of 70.00-138.60 μM, and K i constants were in the range of 48.30 ± 9.81-162.35 ± 20.47 μM. Nimodipine presented the highest docking score and had competitive inhibition, the benzene and pyridine rings were found to enter the cavity for hCA I. Nifedipine and isradipine did not affect hCA II. Among these drugs, nitrendipine was found to be the most potent inhibitor for hCA I and nimodipine for hCA II. These compounds may be useful for CA inhibitors. Communicated by Ramaswamy H. Sarma. © 2020 Informa UK Limited, trading as Taylor & Francis Group.

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AlanDeğerDil
dc.contributor.authorTürkeş, Cüneyt
dc.contributor.authorDemir, Yeliz
dc.contributor.authorBeydemir, Şükrü
dc.date.accessioned2026-10-18T20:28:07.163191507Z
dc.date.available2026-10-18T20:28:07.163191507Z
dc.date.issued2021
dc.description.abstractCarbonic anhydrases (CAs) are potent dehydration of carbonic acid and catalyst of the reversible hydration of carbon dioxide. Here, CA I and CA II was purified from human erythrocytes using the simple chromatographic method and determined the interactions between some calcium channel blockers and the enzymes. Molecular docking studies were performed these compounds. It was found that calcium channel blockers (nimodipine, nilvadipine, nitrendipine, isradipine, and nifedipine) exhibit potential inhibitor properties for hCA I and hCA II. IC 50 values of hCA I were in the range of 9.24-58.00 μM, and K i constants were in the range of 7.60 ± 2.68-35.92 ± 16.01 μM. IC 50 values of hCA II were in the range of 70.00-138.60 μM, and K i constants were in the range of 48.30 ± 9.81-162.35 ± 20.47 μM. Nimodipine presented the highest docking score and had competitive inhibition, the benzene and pyridine rings were found to enter the cavity for hCA I. Nifedipine and isradipine did not affect hCA II. Among these drugs, nitrendipine was found to be the most potent inhibitor for hCA I and nimodipine for hCA II. These compounds may be useful for CA inhibitors. Communicated by Ramaswamy H. Sarma. © 2020 Informa UK Limited, trading as Taylor & Francis Group.
dc.description.sponsorshipThe authors thank Deniz Neziroğlu and Oya Büyükemir for their kind help suggestions during the preparation of the manuscript.
dc.identifier.doi10.1080/07391102.2020.1736631
dc.identifier.eissn1538-0254
dc.identifier.endpage1680
dc.identifier.issn0739-1102
dc.identifier.issue5
dc.identifier.pmid32107977
dc.identifier.scopus2-s2.0-85081329866
dc.identifier.startpage1672
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/13282
dc.identifier.volume39
dc.identifier.wosWOS:000519177800001
dc.language.isoen
dc.publisherTaylor and Francis Ltd.
dc.relation.ispartofJournal of Biomolecular Structure and Dynamics
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectcalcium channel blockers
dc.subjectCarbonic anhydrase
dc.subjectenzyme inhibition
dc.subjectenzyme purification
dc.subjectmolecular docking
dc.subjectCarbonic Anhydrase I
dc.subjectCarbonic Anhydrase II
dc.subjectCarbonic Anhydrase Inhibitors
dc.subjectHumans
dc.subjectIsoenzymes
dc.subjectMolecular Docking Simulation
dc.subjectStructure-Activity Relationship
dc.subjectcalcium channel blocking agent
dc.subjectcarbonate dehydratase I
dc.subjectcarbonate dehydratase II
dc.subjectisradipine
dc.subjectnifedipine
dc.subjectnilvadipine
dc.subjectnimodipine
dc.subjectnitrendipine
dc.subjectcarbonate dehydratase inhibitor
dc.subjectisoenzyme
dc.subjectaffinity chromatography
dc.subjectArticle
dc.subjectcontrolled study
dc.subjectdrug structure
dc.subjectenzyme activity
dc.subjecterythrocyte
dc.subjecthuman
dc.subjecthuman cell
dc.titleCalcium channel blockers: molecular docking and inhibition studies on carbonic anhydrase I and II isoenzymes
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus80
rdl.citation.wos76
rdl.departmentFaculty of Pharmacy, Department of Biochemistry, Erzincan Binali Yıldırım University, Erzincan, Turkey.
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)