ADME predictions and molecular docking insights for novel Gypsogenin–chalcone hybrids and chalcones as antitumor and antimicrobial agents

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The cytotoxicity and antimicrobial efficacy of novel semisynthesized Gypso-Anhd chalcone hybrids (C1–C27) and methoxy‑substituted hydroxychalcones (A1–A27) were evaluated in the following six cancer cell lines: A549, HeLa, HEK293, SHSY5Y, MDA-MB-231, and PANC-1. These derivatives exhibited significant antimicrobial activity, against G+ bacteria (Bacillus subtilis, Enterococcus faecalis, and Staphylococcus aureus), G- bacteria (Escherichia coli and Pseudomonas aeruginosa) and Candida albicans. Among hydroxychalcone derivatives, A19, A25, and A26, demonstrated superior antiproliferative activity compared doxorubicin, with IC50 values of 1.43 ± 0.02 μM (A19, A549), 1.04 ± 0.02 μM (A25, HeLa), 0.90 ± 0.14 μM (A25, HEK293), 0.25 ± 0.03 μM (A25, SHSY5Y), 1.18 ± 0.03 μM (A26, MDA-MB-231), and 0.99 ± 0.03 μM (A26, PANC-1). Likewise, hybrid derivatives C12, C14, and C26 exhibited higher antiproliferative activity than doxorubicin, with IC50 values of 1.33 ± 1.14 μM (C26, A549), 9.51 ± 0.03 μM (C12, HeLa), 4.09 ± 0.65 μM (C26, HEK293), 1.79 ± 0.09 μM (C12, SHSY5Y), 7.97 ± 0.84 μM (C26, MDA-MB-231), and 3.71 ± 0.49 μM (C14, PANC-1). Molecular docking studies confirmed target-specific interactions for all synthesized derivatives. ADME analyses indicated favorable pharmacokinetic profiles, while hydroxy and methoxy substitutions modulated bioactivity, highlighting their potential as anticancer drug candidates. © 2025 Elsevier B.V.

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AlanDeğerDil
dc.contributor.authorEmirdağ, Safiye
dc.contributor.authorUlusoy, Nafia Gökçe
dc.contributor.authorKahriman, Nuran
dc.contributor.authorSerdaroğlu, Vildan
dc.contributor.authorTürkmenoğlu, Burçin
dc.contributor.authorYaylı, Nurettin
dc.date.accessioned2026-10-18T20:25:51.875042297Z
dc.date.available2026-10-18T20:25:51.875042297Z
dc.date.issued2025
dc.description.abstractThe cytotoxicity and antimicrobial efficacy of novel semisynthesized Gypso-Anhd chalcone hybrids (C1–C27) and methoxy‑substituted hydroxychalcones (A1–A27) were evaluated in the following six cancer cell lines: A549, HeLa, HEK293, SHSY5Y, MDA-MB-231, and PANC-1. These derivatives exhibited significant antimicrobial activity, against G+ bacteria (Bacillus subtilis, Enterococcus faecalis, and Staphylococcus aureus), G- bacteria (Escherichia coli and Pseudomonas aeruginosa) and Candida albicans. Among hydroxychalcone derivatives, A19, A25, and A26, demonstrated superior antiproliferative activity compared doxorubicin, with IC50 values of 1.43 ± 0.02 μM (A19, A549), 1.04 ± 0.02 μM (A25, HeLa), 0.90 ± 0.14 μM (A25, HEK293), 0.25 ± 0.03 μM (A25, SHSY5Y), 1.18 ± 0.03 μM (A26, MDA-MB-231), and 0.99 ± 0.03 μM (A26, PANC-1). Likewise, hybrid derivatives C12, C14, and C26 exhibited higher antiproliferative activity than doxorubicin, with IC50 values of 1.33 ± 1.14 μM (C26, A549), 9.51 ± 0.03 μM (C12, HeLa), 4.09 ± 0.65 μM (C26, HEK293), 1.79 ± 0.09 μM (C12, SHSY5Y), 7.97 ± 0.84 μM (C26, MDA-MB-231), and 3.71 ± 0.49 μM (C14, PANC-1). Molecular docking studies confirmed target-specific interactions for all synthesized derivatives. ADME analyses indicated favorable pharmacokinetic profiles, while hydroxy and methoxy substitutions modulated bioactivity, highlighting their potential as anticancer drug candidates. © 2025 Elsevier B.V.
dc.description.sponsorshipThis study was supported by Scientific and Technological Research Council of T\u00FCrkiye (TUBITAK) under Grant Number 114R077. The authors thank TUBITAK for their support. We are grateful to Ege University Planning and Monitoring Coordination of Organizational Development, Article Writing and Publication Support Office and Directorate of Library and Documentation for their contribution in editing and proofreading service of this study.
dc.identifier.doi10.1016/j.molstruc.2025.143101
dc.identifier.eissn1872-8014
dc.identifier.issn0022-2860
dc.identifier.scopus2-s2.0-105009473622
dc.identifier.startpage143101
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/10700
dc.identifier.volume1345
dc.identifier.wosWOS:001525655200002
dc.language.isoen
dc.publisherElsevier B.V.
dc.relation.ispartofJournal of Molecular Structure
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subjectADME docking
dc.subjectChalcone
dc.subjectGypsogenin
dc.subjectNatural product
dc.subjectSemisynthesis
dc.subjectAntimicrobial agents
dc.subjectBacteriology
dc.subjectCell culture
dc.subjectCells
dc.subjectDocking
dc.subjectMolecular docking
dc.subjectMolecular modeling
dc.subjectStaphylococcus aureus
dc.subjectYeast
dc.subjectAntiproliferative activities
dc.subjectChalcones
dc.subjectHEK-293
dc.subjectMDA-MB-231
dc.subjectMethoxy
dc.subjectNatural products
dc.subjectEscherichia coli
dc.titleADME predictions and molecular docking insights for novel Gypsogenin–chalcone hybrids and chalcones as antitumor and antimicrobial agents
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus7
rdl.citation.wos7
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)