1,4-Naphthoquinone thiazole urea hybrids bearing morpholine/piperazine: synthesis, crystal structure, aldose reductase and α-glycosidase enzyme inhibition, molecular docking, and electrochemical interaction with dsDNA

ArticleAçık Erişim

Özet

In this study, new 1,4-naphthoquinone thiazole urea hybrids bearing morpholine (3a–d) or piperazine (3e–h) moiety were synthesized in 76–89 % yields and characterized by 1H NMR, 13C NMR, FT-IR, HRMS, and elemental analysis. The stereochemistry of 3d was determined by single crystal x-ray diffraction study. We evaluated the inhibitory potential of these compounds 3a–h on aldose reductase (ALR2) and α-glycosidase enzyme (α-GLY) activity. Our results indicate that these compounds substantially inhibit ALR2 at micromolar doses, with inhibition constants (KIs) between 0.79 and 2.20 μM and inhibit α-GLY KI between 0.67 and 2.82 μM. Molecular docking simulations were utilized to elucidate inhibitory effects and establish structure-activity relationships for the synthesized compounds. DNA interaction studies are of great importance for the synthesis of new drugs and for studying the behavior and mechanisms of action of synthesized drug molecules. Herein, the interaction of 3d selected as a model compound with ct-dsDNA was investigated in the solution phase by the electrochemical method of differential pulse voltammetry (DPV). The decrease in the peak current value of 3d after the addition of the DNA solution confirmed the interaction. Limits of detection (LOD) and quantification (LOQ) for the interaction were found to be 0.099 ppm and 0.327 ppm in the concentration range of 0.348 ppm to 0.739 ppm, respectively. To determine the binding constant, cyclic voltammetry (CV) was utilized and found to be 8.6 × 102 M−1. Additionally, the type of interaction between the 3D molecule and DNA was investigated and supported by molecular docking and Fourier transformed infrared spectroscopy (FTIR). © 2025 Elsevier Ltd

Anahtar Kelimeler

RDL Kalıcı Bağlantı (PID)
https://rdlopen.rawdatalibrary.net/r/ebyu/10814Resmi atıflarda kullanılan kalıcı adres
DOI
https://doi.org/10.1016/j.bmcl.2025.130417Yayıncı resmi DOI adresi
Tam Kayıt
AlanDeğerDil
dc.contributor.authorEfeoglu, Cagla
dc.contributor.authorSadak, Selenay
dc.contributor.authorSahin, Ertan
dc.contributor.authorDemir, Yeliz
dc.contributor.authorTürkeş, Cüneyt
dc.contributor.authorUslu, Bengi
dc.contributor.authorNural, Yahya
dc.date.accessioned2026-10-18T20:25:56.786762469Z
dc.date.available2026-10-18T20:25:56.786762469Z
dc.date.issued2026
dc.description.abstractIn this study, new 1,4-naphthoquinone thiazole urea hybrids bearing morpholine (3a–d) or piperazine (3e–h) moiety were synthesized in 76–89 % yields and characterized by 1H NMR, 13C NMR, FT-IR, HRMS, and elemental analysis. The stereochemistry of 3d was determined by single crystal x-ray diffraction study. We evaluated the inhibitory potential of these compounds 3a–h on aldose reductase (ALR2) and α-glycosidase enzyme (α-GLY) activity. Our results indicate that these compounds substantially inhibit ALR2 at micromolar doses, with inhibition constants (KIs) between 0.79 and 2.20 μM and inhibit α-GLY KI between 0.67 and 2.82 μM. Molecular docking simulations were utilized to elucidate inhibitory effects and establish structure-activity relationships for the synthesized compounds. DNA interaction studies are of great importance for the synthesis of new drugs and for studying the behavior and mechanisms of action of synthesized drug molecules. Herein, the interaction of 3d selected as a model compound with ct-dsDNA was investigated in the solution phase by the electrochemical method of differential pulse voltammetry (DPV). The decrease in the peak current value of 3d after the addition of the DNA solution confirmed the interaction. Limits of detection (LOD) and quantification (LOQ) for the interaction were found to be 0.099 ppm and 0.327 ppm in the concentration range of 0.348 ppm to 0.739 ppm, respectively. To determine the binding constant, cyclic voltammetry (CV) was utilized and found to be 8.6 × 102 M−1. Additionally, the type of interaction between the 3D molecule and DNA was investigated and supported by molecular docking and Fourier transformed infrared spectroscopy (FTIR). © 2025 Elsevier Ltd
dc.description.sponsorshipThe authors thank Scientific and Technological Research Council of Turkey (T\u00DCB\u0130TAK, project grant 120Z687) for financial support.
dc.identifier.doi10.1016/j.bmcl.2025.130417
dc.identifier.eissn1464-3405
dc.identifier.issn0960-894X
dc.identifier.pmid41016668
dc.identifier.scopus2-s2.0-105017333926
dc.identifier.startpage130417
dc.identifier.urihttps://rdlopen.rawdatalibrary.net/r/ebyu/10814
dc.identifier.volume130
dc.identifier.wosWOS:001586199600001
dc.language.isoen
dc.publisherElsevier Ltd
dc.relation.ispartofBioorganic and Medicinal Chemistry Letters
dc.rightsinfo:eu-repo/semantics/openAccess
dc.subject1,4-Naphthoquinone
dc.subjectEnzyme inhibition
dc.subjectMolecular docking, DNA interaction
dc.subjectThiazole
dc.subjectAldehyde Reductase
dc.subjectCrystallography, X-Ray
dc.subjectDNA
dc.subjectDose-Response Relationship, Drug
dc.subjectEnzyme Inhibitors
dc.subjectGlycoside Hydrolase Inhibitors
dc.subjectGlycoside Hydrolases
dc.subjectMolecular Docking Simulation
dc.subjectMolecular Structure
dc.subjectMorpholines
dc.subjectNaphthoquinones
dc.subjectPiperazine
dc.subjectPiperazines
dc.subjectStructure-Activity Relationship
dc.subjectThiazoles
dc.subjectUrea
dc.subject1,4 Naphthoquinone thiazole urea
dc.subject3 deoxyglucosone
dc.subjectabafungin
dc.subjectcarbonate dehydratase
dc.subjectchemicals and drugs
dc.subjectcholinesterase
dc.subjectdouble stranded DNA
dc.subjectfidarestat
dc.subjectfructose 3 phosphate
dc.subjectglutathione
dc.title1,4-Naphthoquinone thiazole urea hybrids bearing morpholine/piperazine: synthesis, crystal structure, aldose reductase and α-glycosidase enzyme inhibition, molecular docking, and electrochemical interaction with dsDNA
dc.typeArticle
dspace.entity.typePublication
rdl.citation.scopus23
rdl.citation.wos24
rdl.departmentDepartment of Biochemistry, Faculty of Pharmacy, Erzincan Binali Yıldırım University, TR-24002 Erzincan, Türkiye.
rdl.oa.statusgreen
rdl.source.indexSCOPUS
rdl.source.indexWOS
rdl.source.indexPUBMED
rdl.wos.indexScience Citation Index Expanded (SCI-EXPANDED)
rdl.wos.indexIndex Chemicus (IC)